Selecting the right electrophoresis equipment is critical for maintaining efficiency and reproducibility in modern life science laboratories. As 2026 approaches, the market offers a blend of reliable workhorses and innovative automated systems designed to streamline nucleic acid and protein separation. This guide evaluates the top models available this year, focusing on performance, versatility, and new technological advancements to help professionals make informed purchasing decisions. Best Overall: Thermo Scientific Owl EasyCast B2 — Reliable, leak-proof design perfect for standard daily workflows. Best Value: Fisherbrand Real Time Electrophoresis System — Offers integrated visualization and smartphone compatibility at an accessible price. Best For Speed / Throughput: Agilent ProteoAnalyzer System — Automated parallel capillary electrophoresis for rapid protein analysis (New 2024). Most Versatile: Cleaver Scientific multiSUB Choice — Modular design supports three different tray sizes in a single tank. Best High-End Option: Applied Biosystems SeqStudio Flex Dx — Cutting-edge capillary electrophoresis for clinical and research flexibility (New 2025). Price Range: $800 – $1,200 (Tank only)
Best For: Overall Reliability The Thermo Scientific Owl EasyCast B2 remains the gold standard for horizontal gel systems in academic and industrial labs. Its popularity stems from a simple, gasketed design that allows users to cast gels directly in the buffer chamber without tape or additional casting gates. This "cast-in-place" capability significantly reduces preparation time and minimizes the risk of leaks, making it the most dependable choice for routine DNA and RNA separation. Key Specs Gel Size: 12 x 14 cm Sample Capacity: Up to 48 samples Buffer Volume: ~800 mL Material: UV-transmissible (UVT) acrylic Dimensions: 18 x 21 x 10 cm Performance & Applications
The Owl EasyCast B2 excels in durability and ease of use, ensuring consistent banding patterns for daily applications. Its UV-transmissible tray allows for direct imaging without handling fragile gels, reducing breakage. Ideally suited for restriction digest analysis, PCR verification, and Northern blotting, this model is a staple for laboratories prioritizing longevity and consistent, leak-free performance. Price Range: $900 – $1,300
Best For: Budget & Educational Use The Fisherbrand Real Time Electrophoresis System modernizes the traditional horizontal gel run by integrating blue LED visualization directly into the base. This allows researchers to view DNA migration in real-time without moving the gel to a transilluminator. It also features a uniquely designed hood compatible with smartphones, enabling instant image capture and sharing, which is particularly valuable for teaching labs or quick verification steps. Key Specs Gel Size: 10 x 10 cm Sample Capacity: Up to 22 samples Visualization: Integrated Blue LED (465 nm) Power Supply: Included (integrated unit) Smart Feature: Smartphone imaging hood Performance & Applications
This system is designed for cost-conscious labs that do not want to sacrifice modern convenience. The blue light technology eliminates the need for ethidium bromide and UV protection, making it safer for general use. It is highly effective for quick checks of PCR products and educational demonstrations where visual feedback is essential. The compact footprint saves bench space, while the all-in-one design removes the need for separate power supplies and transilluminators. Price Range: $80,000 – $120,000 (Estimate)
Best For: Speed / Throughput Released in early 2024, the Agilent ProteoAnalyzer brings automated parallel capillary electrophoresis (CE) to protein analysis. Unlike traditional SDS-PAGE which is labor-intensive and manual, this system automates the entire process from sample separation to data analysis. It is designed to handle complex protein mixtures with high resolution, providing a streamlined solution for labs that require high-throughput quality control and characterization. Key Specs Technology: Automated Capillary Electrophoresis (CE-SDS) Throughput: 12 capillaries (parallel processing) Sample Format: 96-well plates, standard vials Reagents: Pre-packaged kits for protein analysis Release Year: 2024 Performance & Applications
The ProteoAnalyzer significantly reduces the hands-on time required for protein quality control. By automating the separation and detection steps, it eliminates the variability associated with manual gel pouring and staining. It is particularly relevant for biopharmaceutical laboratories focusing on monoclonal antibodies, protein purification, and stability testing. The system delivers digital data output, simplifying report generation and compliance documentation for regulated environments. Price Range: $500 – $900
Best For: Versatility The Cleaver Scientific multiSUB Choice stands out for its modularity. A single tank accommodates three different gel tray lengths (7 cm, 10 cm, and 15 cm), allowing researchers to switch between rapid screening and high-resolution long runs without purchasing multiple units. This flexibility makes it an economical choice for labs with diverse application needs, ranging from quick checks to complex restriction mapping. Key Specs Tray Options: 15 x 7 cm, 15 x 10 cm, 15 x 15 cm Max Sample Capacity: Up to 210 samples Combs: Multi-channel pipette compatible Tank Construction: Injection-molded acrylic Buffer Volume: 500 mL Performance & Applications
This unit is engineered for flexibility. The ability to run up to 210 samples using multiple combs makes it suitable for medium-throughput screening, while the longer tray options provide the resolution needed for separating bands with similar molecular weights. It is widely used in cloning, RFLP analysis, and genotyping workflows where sample numbers and resolution requirements fluctuate frequently. Price Range: Inquire (High-End Capital Equipment)
Best For: High-End Option Recently released in 2025, the SeqStudio Flex Dx is the latest evolution in capillary electrophoresis for clinical and diagnostic settings. This system is designed for IVD (In Vitro Diagnostic) use, offering unparalleled flexibility and connectivity. It features improved plate handling, allowing for continuous loading and prioritization of urgent samples, which is a game-changer for busy clinical laboratories managing high volumes of Sanger sequencing and fragment analysis data. Key Specs Capillaries: 8 or 24 capillary array Connectivity: Cloud-enabled with remote monitoring Plate Capacity: 4-plate continuous loading Interface: Large touchscreen with voice commands Release Year: 2025 Performance & Applications
The SeqStudio Flex Dx represents the pinnacle of modern electrophoresis technology. It integrates seamlessly into regulated workflows, offering advanced features like remote troubleshooting and data sharing. Its primary strength lies in its ability to deliver gold-standard Sanger sequencing data with minimal user intervention. Ideally suited for diagnostic labs performing gene editing confirmation, pathogen detection, and complex genetic disease screening, this system ensures data integrity and operational continuity. Model Best For Key Features Typical Price Range Owl EasyCast B2 Overall Reliability Cast-in-place design, leak-proof, durable acrylic $800 – $1,200 Fisherbrand Real Time Budget / Education Integrated blue light, smartphone hood, all-in-one $900 – $1,300 Agilent ProteoAnalyzer Speed / Throughput Automated parallel CE, protein analysis, digital data $80,000 – $120,000* multiSUB Choice Versatility 3 tray sizes in one tank, high sample capacity $500 – $900 SeqStudio Flex Dx High-End / Clinical 4-plate loading, IVD compliant, remote monitoring Inquire *Price estimates for high-end automation systems vary significantly by configuration. The electrophoresis equipment market in 2026 offers a diverse range of solutions, from the rugged simplicity of the Owl EasyCast B2 to the sophisticated automation of the Agilent ProteoAnalyzer and SeqStudio Flex Dx. Laboratories must weigh their need for throughput and digital integration against budget constraints. Whether prioritizing a low-cost visualization tool or a fully automated diagnostic platform, selecting the right electrophoresis equipment ensures that research and diagnostic goals are met with precision and efficiency. This article was created with the assistance of Generative AI and has undergone editorial review before publishing.
Quick Summary
Thermo Scientific Owl EasyCast B2 – Thermo Fisher Scientific

Fisherbrand Real Time Electrophoresis System – Fisher Scientific

Agilent ProteoAnalyzer System – Agilent Technologies

Cleaver Scientific multiSUB Choice – Cleaver Scientific

Applied Biosystems SeqStudio Flex Dx Genetic Analyzer – Thermo Fisher Scientific

Comparison Table
Conclusion: Choosing the Right Electrophoresis Equipment for 2026